PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008224893.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 462aa    MW: 49526.5 Da    PI: 6.2214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008224893.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.3e-053543911254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_008224893.1 354 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 391
                     677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973342391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.77E-6352396No hitNo description
SuperFamilySSF474598.51E-12352410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-9356399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MAEEFQAGIC GSSWWNTSRH ALVASPCSVG FNDHMGSFGC PNDMVDIKAS RSSCGEINNS  60
VSDHDDDHQH TDSGSVLIDS TLQMIGFDHS SSSSSTPSDL NQALLLSRSG GGRAESNFHN  120
SMLQEGVGVD EDSSSLIDGF KPMSQDFSLD QLGSSSSSGF PITSSSSAAN SYGFPSTFLQ  180
SIFDSEVSQP QPQQSLFNNN HFSNDLLLPP SPTSSCWPPR YSPSSCLRPS AVSLPKQLQP  240
GGGGGGGLHF PNNINTPFWN TPAATALNHG NGIRSSNGLF SSSQSQLTAP ASSALVHEHK  300
PNSHNFTTKG NTNEDVQDSN SVVKKSGSSM SSCEPVFKRA RIETPSPLPT FKVRKEKLGD  360
RITALQQLVS PFGKTDTASV LHEAIEYIKF LHEQVSVLST PYMKNGAPMQ HQQGSDHKMK  420
EAEGAKHDLK SRGLCLVPIS STFPVANETT DFWTPTFGAT FR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224893.10.0PREDICTED: transcription factor bHLH112 isoform X1
TrEMBLM5WU900.0M5WU90_PRUPE; Uncharacterized protein
STRINGVIT_00s0274g00070.t011e-140(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.15e-54bHLH family protein